PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011084929.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GeBP
Protein Properties Length: 309aa    MW: 35499.6 Da    PI: 6.126
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011084929.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57376.44.9e-2494186397
          DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96 
                     f++++seeDei+lL+Gl  f a+      + +++fy+f+k+s+  +++++q++eKirrLK Kf+++ k+ +++g   +fs +h++ +fe+sk +W
  XP_011084929.1  94 FSKIFSEEDEISLLKGLAIFWADGR---NNKWTEFYNFIKDSLPHQFTRTQVSEKIRRLKGKFENNFKRaRANGGWLDFSDAHESAVFEVSKTLW 185
                     899*****************77755...469************************************997889999******************* PP

          DUF573  97 g 97 
                     g
  XP_011084929.1 186 G 186
                     8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.3E-2294186IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MRPQRLSVSA DGEDEEDKQQ TLNEADEETD SDPDSKSEEG DCTAAVPPKK PKLNLPREEE  60
VPIPRKDESK CFSPSASNFI IAPAAKPSEK NTPFSKIFSE EDEISLLKGL AIFWADGRNN  120
KWTEFYNFIK DSLPHQFTRT QVSEKIRRLK GKFENNFKRA RANGGWLDFS DAHESAVFEV  180
SKTLWGEDEN EAGDKHAQKE KETPQRGDRS RSQKKRKRAG KEHDAEKEIV KNQKQVGKIG  240
KEEFASAYPF LSSSLDEDGY FNIIKEKILF IGREKAQELE EKCRDVKAAE LRLERKRIDL  300
IRRDLHNLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011084929.10.0PREDICTED: mediator-associated protein 1-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13664413
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.12e-12DNA-binding storekeeper protein-related transcriptional regulator